Index

_

__init__() (fitderiv method) (platereader method)

A

absorbdf() (in module om_code.omgenutils) add_to_sc() (platereader method) addcolumn() (platereader method) addcommonvar() (platereader method) addnumericcolumn() (platereader method) analyseContentsofWells() (in module om_code.loadplatedata)

analyseOldTecan() (in module om_code.analyseOldTecan) analyseSunrise() (in module om_code.analyseSunrise) analyseTecan() (in module om_code.analyseTecan) applyautoflcorrection() (in module om_code.corrections) attributes (platereader property) augmentdf() (in module om_code.omplot) averageoverexpts() (platereader method)

C

calculatestats() (fitderiv method) changewdir() (platereader method) cleansc() (in module om_code.omstats) close (platereader property) contentsofwells() (platereader method) CorrectAuto

correctauto() (platereader method) correctauto1() (in module om_code.corrections) correctauto2() (in module om_code.corrections) corrections() (platereader method) correctmedia() (platereader method) correctOD() (platereader method)

E

estimateerrorbar() (in module om_code.omgenutils)

exportdf() (platereader method) extractwells() (in module om_code.sunder)

F

figs2pdf() (in module om_code.omgenutils) FileNotFound findareasunder() (in module om_code.omstats) findiqr() (in module om_code.omgenutils) findlocalmaxderiv() (in module om_code.omstats)

findODcorrection() (in module om_code.corrections) findsmoothvariance() (in module om_code.omgenutils) findsummarystats() (in module om_code.omstats) fitderiv (class in om_code.omfitderiv) fitderivsample() (fitderiv method)

G

getall() (in module om_code.sunder) getcons() (in module om_code.sunder) getdataframe() (platereader method) getexps() (in module om_code.sunder) GetFitnessPenalty

getfitnesspenalty() (in module om_code.getfitnesspenalty) getstats() (platereader method) getstrs() (in module om_code.sunder) getsubset getsubset() (in module om_code.sunder)

I

IgnoreWells ignorewells() (platereader method) importdf() (platereader method)

info (platereader property) initialiseprogress() (in module om_code.admin) initlog() (in module om_code.clogger) islistempty() (in module om_code.omgenutils)

L

load() (platereader method) loadfromplate() (in module om_code.loadplatedata)

log (platereader property) log() (in module om_code.clogger) ls (platereader property)

M

make_s() (in module om_code.admin) makelist() (in module om_code.omgenutils) makewellsdf() (in module om_code.admin) mergedicts() (in module om_code.omgenutils) module om_code om_code.admin om_code.analyseOldTecan om_code.analyseSunrise om_code.analyseTecan om_code.clogger om_code.corrections om_code.getfitnesspenalty om_code.loadplatedata om_code.omerrors om_code.omfitderiv om_code.omgenutils om_code.omplot om_code.omstats om_code.sunder omniplate omniplate.Omniplate

N

nanstdzeros2nan() (in module om_code.corrections)

natural_keys() (in module om_code.omgenutils)

O

om_code module om_code.admin module om_code.analyseOldTecan module om_code.analyseSunrise module om_code.analyseTecan module om_code.clogger module om_code.corrections module om_code.getfitnesspenalty module om_code.loadplatedata module

om_code.omerrors module om_code.omfitderiv module om_code.omgenutils module om_code.omplot module om_code.omstats module om_code.sunder module omniplate module omniplate.Omniplate module omniplateError

P

performmediacorrection() (in module om_code.corrections) platereader (class in omniplate.Omniplate) plot() (platereader method) plot_rs() (in module om_code.omplot) plot_sc() (in module om_code.omplot) plot_wells() (in module om_code.omplot)

PlotError plotfinddf() (in module om_code.omplot) plotfit() (fitderiv method) plotplate() (in module om_code.omplot) printstats() (fitderiv method) processref1() (in module om_code.corrections) processref2() (in module om_code.corrections)

R

rename() (platereader method)

restricttime() (platereader method) run() (fitderiv method)

S

savefigs() (platereader method) savelog() (platereader method)

showwells() (platereader method) statserr() (in module om_code.omstats)

U

UnknownDataFrame

UnknownPlateReader update_s() (in module om_code.admin)

W

webhelp() (platereader method)